PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038090.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 200aa    MW: 21836.8 Da    PI: 8.4869
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.1e-1338122997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        + k + + +p + + +h +++++s  ++le + g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+ +   +++l+v ++
  TRIDC4AG038090.1  38 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPGGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHSK--GKTSLKVLAL 122
                       56678999******9.776678999*****************..7777777*************************44..4555566665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSTGCYLTKS QDEKVVEIAR KIRSEIPLYV AIMKKLNVNV KDCSINIPLR LVSHLKEEAG  60
SAIIKLEAPG GNIYNVRASK HSEDQVVLQS DWDAFVAANH IQLNDLLIFH SKGKTSLKVL  120
ALDPSGCEKN SSCFDTKKIS KTGEGSVQIT DARPCTVEII DLTSSDDDHT EREDAGRSSG  180
RRKQVPGSHA KARKMASASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-11B3 family protein