PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG034400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 169aa MW: 19342.1 Da PI: 10.5525 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.4 | 1.8e-17 | 75 | 107 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C++C++ +Tp+WR gp g+ tLCnaCG++y+ TRIDC4AG034400.1 75 CTHCRVEDTPQWRTGPAGSGTLCNACGIRYKMG 107 *******************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
RKPHHRRGVR RRAASWSLAL PPQLMSAGAY DCNGDSNAND DKDKDYVLSH CKKGRRNGGP 60 RPARRQQKKT EDKICTHCRV EDTPQWRTGP AGSGTLCNAC GIRYKMGKLF PEYRPSTSPE 120 FSSLEHSNRH RNVERIREKK KKMKVMAPEV PVSPDADDKV LLRVCKYER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60530.1 | 2e-27 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG034400.1 |