PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG033230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 428aa MW: 49201.1 Da PI: 7.2855

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG033230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81	1.6e-25	112	207	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt ++v++Li+a ++++e+ ++++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d TRIDC4AG033230.2 112 KWTGSMVKLLITAASYTGEDPGADQgvrrniaivQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKRLTDILGRGtACRVVENPALLD 204 7*******************998888899999******************************************55********* PP trihelix 84 qle 86 +++ TRIDC4AG033230.2 205 SMH 207 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
NMMQGIPYSG MNVHGSSMQM HATNSGKQLF NQSQMLGSFA MPINRATAPD NPGFQFGEHE 60 KKDHHQQQQQ QQQHSHYSKN SISDEEEHDM TEDVTDTQND KGKKGSAWHR MKWTGSMVKL 120 LITAASYTGE DPGADQGVRR NIAIVQKKGK WKAISKVMGE RGCSVSPQQC EDKFNDLNKR 180 YKRLTDILGR GTACRVVENP ALLDSMHHLS DKMKEDARKI LNSKHLFYEQ MCSYHNNNRV 240 NLPEDLALQH SLQVALRCKD EHDLRRDASA DPEEGDQSAD SDYEEHDKEH QTVHTNLRDS 300 SMNKRMCHAV DHGDVGFVTS SSNGVSGRFN PHDITLDINN AIPGGANLSF VRKDLTSQQI 360 ELQKHRLQTQ EQKLEVAKQR LKWERFRMKK DREIERMTLE NEQMMLQQKR LELQLRHNEL 420 ELELKVHV

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

NMMQGIPYSG MNVHGSSMQM HATNSGKQLF NQSQMLGSFA MPINRATAPD NPGFQFGEHE  60
KKDHHQQQQQ QQQHSHYSKN SISDEEEHDM TEDVTDTQND KGKKGSAWHR MKWTGSMVKL  120
LITAASYTGE DPGADQGVRR NIAIVQKKGK WKAISKVMGE RGCSVSPQQC EDKFNDLNKR  180
YKRLTDILGR GTACRVVENP ALLDSMHHLS DKMKEDARKI LNSKHLFYEQ MCSYHNNNRV  240
NLPEDLALQH SLQVALRCKD EHDLRRDASA DPEEGDQSAD SDYEEHDKEH QTVHTNLRDS  300
SMNKRMCHAV DHGDVGFVTS SSNGVSGRFN PHDITLDINN AIPGGANLSF VRKDLTSQQI  360
ELQKHRLQTQ EQKLEVAKQR LKWERFRMKK DREIERMTLE NEQMMLQQKR LELQLRHNEL  420
ELELKVHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-98	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG033230.2