PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG033230.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 440aa MW: 50317.2 Da PI: 7.1645

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG033230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.9	1.7e-25	121	216	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt ++v++Li+a ++++e+ ++++ +kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d TRIDC4AG033230.1 121 KWTGSMVKLLITAASYTGEDPGADQgvrrniaivQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKRLTDILGRGtACRVVENPALLD 213 7*******************998888899999******************************************55********* PP trihelix 84 qle 86 +++ TRIDC4AG033230.1 214 SMH 216 998 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEGSNLPTGN MMQGIPYSGM NVHGSSMQMH ATNSGKQLFN QSQMLGSFAM PINRATAPDN 60 PGFQFGEHEK KDHHQQQQQQ QQHSHYSKNS ISDEEEHDMT EDVTDTQNDK GKKGSAWHRM 120 KWTGSMVKLL ITAASYTGED PGADQGVRRN IAIVQKKGKW KAISKVMGER GCSVSPQQCE 180 DKFNDLNKRY KRLTDILGRG TACRVVENPA LLDSMHHLSD KMKEDARKIL NSKHLFYEQM 240 CSYHNNNRVN LPEDLALQHS LQVALRCKDE HDLRRDASAD PEEGDQSADS DYEEHDKEHQ 300 TVHTNLRDSS MNKRMCHAVD HGDVGFVTSS SNGVSGRFNP HDITLDINNA IPGGANLSFV 360 RKDLTSQQIE LQKHRLQTQE QKLEVAKQRL KWERFRMKKD REIERMTLEN EQMMLQQKRL 420 ELQLRHNELE LELKGNANHA

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEGSNLPTGN MMQGIPYSGM NVHGSSMQMH ATNSGKQLFN QSQMLGSFAM PINRATAPDN  60
PGFQFGEHEK KDHHQQQQQQ QQHSHYSKNS ISDEEEHDMT EDVTDTQNDK GKKGSAWHRM  120
KWTGSMVKLL ITAASYTGED PGADQGVRRN IAIVQKKGKW KAISKVMGER GCSVSPQQCE  180
DKFNDLNKRY KRLTDILGRG TACRVVENPA LLDSMHHLSD KMKEDARKIL NSKHLFYEQM  240
CSYHNNNRVN LPEDLALQHS LQVALRCKDE HDLRRDASAD PEEGDQSADS DYEEHDKEHQ  300
TVHTNLRDSS MNKRMCHAVD HGDVGFVTSS SNGVSGRFNP HDITLDINNA IPGGANLSFV  360
RKDLTSQQIE LQKHRLQTQE QKLEVAKQRL KWERFRMKKD REIERMTLEN EQMMLQQKRL  420
ELQLRHNELE LELKGNANHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	5e-99	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG033230.1