PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG027860.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 152aa MW: 17743.2 Da PI: 10.3391

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG027860.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv+ v+++G ++W+ +a+ g++Rt+k+c++rw +yl TRIDC4AG027860.9 10 KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	54.5	2.8e-17	64	108	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++++E+ l++++++++G++ W++Iar+++ gRt++++k++w++++ TRIDC4AG027860.9 64 GCMSPQEEHLIIELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 108 6789***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MVTVQDEMRK GPWTEQEDLQ LVCTVRLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG 60 LKHGCMSPQE EHLIIELHAR WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK KAQERKIDMS 120 PSSSSSSFTY QSCLLETAPI IRMDGGSTHN GT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	7e-71	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG027860.9