PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG027860.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 164aa MW: 18246.8 Da PI: 4.7493 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.4 | 1.8e-09 | 10 | 44 | 1 | 33 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..T CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..k 33 +g+WT++Ed++lv+ v+++G ++W+ +a+ g TRIDC4AG027860.2 10 KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGlrG 44 79***************************999554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MVTVQDEMRK GPWTEQEDLQ LVCTVRLFGD RRWDFVAKVS GLRGGRPSSS SSSFTYQSCL 60 LETAPIIRMD GGSTHNGTTC FSSVLKSNQS VMDGYSMDQI WKEIEAPAML PIDDKACSNL 120 PCPLLPSPMG DRYCPPEVVW KMDNGDLKML APQFGYGNGE RSCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-16 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG027860.2 |