PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG027670.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 27585 Da PI: 9.5319 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.8e-17 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4AG027670.4 36 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 83 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.1 | 8.5e-18 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4AG027670.4 89 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 132 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
PATSSMDVVL QSRSSNSMAA EPEEEAEPEE EAELRRGPWT VDEDLTLINY IADHGEGRWN 60 ALARAAGLRR TGKSCRLRWL NYLRPDVKRG NFTADEQLLI LDLHSRWGNR WSKIAQHLPG 120 RTDNEIKNYW RTRVQKHAKQ LNCDVGSATF KDAMRYLWMP RLVERIHAAR RHGHHISREQ 180 LCRQRGHHQQ VGIVGFLHVG ALRRGEEPAC PWQRREDNER RGLDAGSGPR VLGHAYADPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 9e-65 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG027670.4 |