PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG023960.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 116aa MW: 13504.7 Da PI: 11.183

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG023960.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	41.6	2.6e-13	65	109	19	63
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrsw 63 +++P arikki++adedv +i+ +Pvl+s+a elf+ +l s+ TRIDC4AG023960.7 65 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDHSY 109 689***********************************9987766 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
QISFWHESVC PVPWWCKLVE RQQNKKSNRQ RRTRKENTQK IDHDCRHRAR RGVGGATKMR 60 KKLGTRFPAA RIKKIMQADE DVGKIALAVP VLVSRALELF LQDLIDHSYK ITLQSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	32	RQQNKKSNRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	7e-29	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG023960.7