PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 333aa    MW: 36528.8 Da    PI: 8.8064
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.34.9e-1055111155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV+++++++r++A+++d  +   g krk  + g +  ++ Aa+a++ a++k++g
  TRIDC4AG016710.2  55 SCYRGVTRHRWTKRYEAHLWDnTCRrEGqKRKGRQGG-YEKEDRAARAYDLAALKYWG 111
                       79*******************5555444666888866.5555*************987 PP
2AP251.32.8e-16154205155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a++k++g
  TRIDC4AG016710.2 154 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 205
                       78****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
PTLGADPGRL LLASSRNDVH ASTDLAVAAP VETTGSSSAL AAALPLTPSS GQRTSCYRGV  60
TRHRWTKRYE AHLWDNTCRR EGQKRKGRQG GYEKEDRAAR AYDLAALKYW GVNATTNFPK  120
ENYIRELEEM QNMSRHELVA SLRRKSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD  180
LYLGTFATEE EAAEAYDIAA LKFRGDNAVT NFEPSRYNLE AIACSDLPVN GRRMSSHKPT  240
AAAAPEAQGE ITFVSSAPPI PQQSCSDVQV PPYVLHGLLQ LQASEPLHAL PLSSYSFGEP  300
SFYWPFGDVE QKVQLDSKVE VAGGILQLAN SAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.12e-67AP2 family protein