PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG016550.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 35133 Da PI: 4.563 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd lv++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4AG016550.2 22 RGPWTVEEDIVLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4AG016550.2 75 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7889******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MDMAHERDSS SEEEVMAGDL RRGPWTVEED IVLVNYIAAH GEGRWNSLAR SAGLKRTGKS 60 CRLRWLNYLR PDLRRGSITP QEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAAATADA VQAAADTPLS WQHGADDALY 180 ESPELPVDAC WPAEYAAVAG GQLPNASVAE LSSTTTAGSS SPSTTDSGAG AQPSWPAAVD 240 GAEWFTTACD ASSAAATICD TDQLIQQQAP SQPAGAWTSE PLPSLGFPEL GVADFEMGSF 300 DVDSIWSMDD LWNTQPQFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 2e-83 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG016550.2 |