PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG016360.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 253aa MW: 27896.2 Da PI: 9.1409 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l+++++++G g+W++ ++ g+ R++k+c++rw +yl TRIDC4AG016360.4 14 RGRWTAEEDDILANYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.2e-15 | 67 | 138 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........................tWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eEd+l+v++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC4AG016360.4 67 RGNISKEEDDLIVKLHATLGNRenactgrdrcrvlsrvetcfeeslsEWSLIASHLP-GRTDNEIKNYWNSHL 138 7899*****************************************************.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRAPCCEKV GLKRGRWTAE EDDILANYIA KHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRDGVRRGNI SKEEDDLIVK LHATLGNREN ACTGRDRCRV LSRVETCFEE SLSEWSLIAS 120 HLPGRTDNEI KNYWNSHLSR QIHTFRRIYT AVSDTAITVD VNKLSAAGKR RGGRTPGQSP 180 RSSTKKKPVP EPITKAKDES SPAGAASSVS SSPHSDEARS AVVDPDQNQP NNSISVSHTS 240 DGPCSEDGTW PMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-69 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG016360.4 |