PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG015600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 307aa    MW: 32664.4 Da    PI: 6.0327
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG015600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.8e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +l+ +   +G+g+W++++++ g++R++k+c++r+ +yl
  TRIDC4AG015600.1 14 KGPWTAEEDAKLLAYTSNHGTGNWTSVPQRAGLKRCGKSCRLRYTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding53.55.4e-1769110346
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++T+eE+el+v ++++lG++ W++Ia+ ++ gRt++++k++w++
  TRIDC4AG015600.1  69 NFTQEEEELIVTLHAMLGSR-WSLIANQLP-GRTDNDVKNYWNT 110
                       89******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGRPPCCDKA NVKKGPWTAE EDAKLLAYTS NHGTGNWTSV PQRAGLKRCG KSCRLRYTNY  60
LRPNLKHENF TQEEEELIVT LHAMLGSRWS LIANQLPGRT DNDVKNYWNT KLSKKLRQRG  120
IDPITHRPIA DLMQSIGTLA IRPPPSAAGA SSSSYIPVNP AAAPGLQPLH DDVKYHAVLN  180
HHQQQVITLL DPDAPGAAAS PDHQLKWSDF LADDAAAFEA APQVVLGQYQ EAAVAGGGAA  240
YGDTDSIAAD GVGGGGEDSA ASAFIDAMLD SDKKMGVDQL IADLLADPAY YYGGGSSSST  300
SELGRGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-66MYB family protein