PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 682aa MW: 75527.8 Da PI: 6.8269

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.3	4.5e-27	39	129	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ ++s+++++i++r+ vCskeg++e+++ + ++++++r+ tr+gCka++++kk + gkw+vtk+++ HnH TRIDC4AG011440.1 39 DFYSLYARHAGFRIRISRYTRSRHDNSIISRRIVCSKEGFHETRNCEglhPDQKQQERTGTRVGCKAMIMIKKIDPGKWVVTKFVKTHNHG 129 6*****************************************9999999999**********************************6 PP
2	FAR1	89.4	5e-28	177	269	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+ GF+ r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.1 177 FYINYARLNGFRARISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 269 9***************************************99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF RIRISRYTRS 60 RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KIDPGKWVVT 120 KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN 180 YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG 240 CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA KSSDPDEVKV 300 EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC 360 HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTTPS QLTVFQESVS KLMFIPTNLL 420 TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS TSSRATQGNH 480 STYHGHSEET TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ 540 PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI KAIESKIRSG 600 GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE 660 ASELETDFEN CSGHENHDTA DC

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF RIRISRYTRS  60
RHDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR VGCKAMIMIK KIDPGKWVVT  120
KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN  180
YARLNGFRAR ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG  240
CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA KSSDPDEVKV  300
EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC  360
HPIMPHRGVS GSESKHKVVQ MKTMSASQCS DVAKQKTTPS QLTVFQESVS KLMFIPTNLL  420
TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS TSSRATQGNH  480
STYHGHSEET TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ  540
PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI KAIESKIRSG  600
GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE  660
ASELETDFEN CSGHENHDTA DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-36	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.1