PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010210.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 829aa MW: 91407.3 Da PI: 5.5942

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.5e-08	119	161	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.2 119 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 161 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 829 aa Download sequence
KNSRAIQKKV HVATDPSFSD CSHLSFLNFP QFLQIPNSPI SKFPQTVENF VPNRNLLAAL 60 PDRHHEKSRD ICAANVMEKE VCEEMSPLSQ PVDLPDATAP SASDPSQKPA KKATRQWAAW 120 TRQEEESFFN ALRQVGKNFE KITLRVQSKN KDQVRHYYYR LVRRMKKLLG PGFSLDARNS 180 KDTIAAMLRW WSLLEKFSCS ASKLHLKPRR FKTFVDALGN QLLKDRKRTR RKCSLGDTRL 240 SSSSPVLSKT PGNQSFAVGL LPMDAQNGSK GASSKGAFMK RVAEPNSNKS GVIRGDLSAT 300 RTVRQKRRAG GAGACAAYKK WERAAMAGVS LVADAAEELE RKMTTQNLSC NADATVLASS 360 PNNVSTVDDV GTNHMKEADP QAPSKLKLQL FPINEATRKA LEKDDHNPHL ELTLSSKKKM 420 SSVLEHLNRK WGNSNIACGE LVLFPYCAHQ EDLATYQRWT TQDTVAVADV FFSVNSPSIF 480 RLRYGWFSLA ELEAGLSEIS LTRFENCMIP EDIQVKSSSE ACVQKDGTLP SDFTSEQSSN 540 NSKDQSALLL GTPSSTGKNA AEEPSINTFP SQSGDHNQEQ VPANQAFEVD PQMDCLAISE 600 VDWADTLTDI SVGYLLTEAS KAANLDCEVT SIAKNPLFDE NPCSYDSFDA AVALHASRYQ 660 AAEQPAQTSH STIWGAEETC DEFSFMLATA RKQQGLNTSA SSPPDSDNEV HSSNSEGFQG 720 FLQDLAGGDT LGNPCADDVK AMEELCARSP PQSDNDFGLK DQPLDDAFWP ESLGPLDLDI 780 PPIRSLADEF ILGDSQNSWS RMMENSMDAF RNMSFFVSDN NDSVLPPIM

Sequence ? help Back to Top

Protein Sequence Length: 829 aa Download sequence

KNSRAIQKKV HVATDPSFSD CSHLSFLNFP QFLQIPNSPI SKFPQTVENF VPNRNLLAAL  60
PDRHHEKSRD ICAANVMEKE VCEEMSPLSQ PVDLPDATAP SASDPSQKPA KKATRQWAAW  120
TRQEEESFFN ALRQVGKNFE KITLRVQSKN KDQVRHYYYR LVRRMKKLLG PGFSLDARNS  180
KDTIAAMLRW WSLLEKFSCS ASKLHLKPRR FKTFVDALGN QLLKDRKRTR RKCSLGDTRL  240
SSSSPVLSKT PGNQSFAVGL LPMDAQNGSK GASSKGAFMK RVAEPNSNKS GVIRGDLSAT  300
RTVRQKRRAG GAGACAAYKK WERAAMAGVS LVADAAEELE RKMTTQNLSC NADATVLASS  360
PNNVSTVDDV GTNHMKEADP QAPSKLKLQL FPINEATRKA LEKDDHNPHL ELTLSSKKKM  420
SSVLEHLNRK WGNSNIACGE LVLFPYCAHQ EDLATYQRWT TQDTVAVADV FFSVNSPSIF  480
RLRYGWFSLA ELEAGLSEIS LTRFENCMIP EDIQVKSSSE ACVQKDGTLP SDFTSEQSSN  540
NSKDQSALLL GTPSSTGKNA AEEPSINTFP SQSGDHNQEQ VPANQAFEVD PQMDCLAISE  600
VDWADTLTDI SVGYLLTEAS KAANLDCEVT SIAKNPLFDE NPCSYDSFDA AVALHASRYQ  660
AAEQPAQTSH STIWGAEETC DEFSFMLATA RKQQGLNTSA SSPPDSDNEV HSSNSEGFQG  720
FLQDLAGGDT LGNPCADDVK AMEELCARSP PQSDNDFGLK DQPLDDAFWP ESLGPLDLDI  780
PPIRSLADEF ILGDSQNSWS RMMENSMDAF RNMSFFVSDN NDSVLPPIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	1e-163	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.2