PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG009990.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | BBR-BPC | ||||||||
Protein Properties | Length: 267aa MW: 29079.8 Da PI: 10.8895 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 303.5 | 7.5e-93 | 64 | 267 | 91 | 301 |
GAGA_bind 91 lasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183 +++++p+g +++++++ +++lq+ ++++ +++eeek+ + +e+++++ k+ +kkrq++++pk +k kk+kk +++ ++ +++ TRIDC4AG009990.5 64 AVHHHPTGFGMMPDARGAHTLQM-----MQPQEPPVPEEEKIAPPL-VEEHSVVGSKPPVKKRQQGRQPKLPKPKKPKK-VATPGEDGAPKAR 149 34999******************.....677777777888766555.556777788888888*****************.5566677777777 PP GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeG 276 +rs+ + k +++v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP++tkrrgaRiagrKmSqgafkk+LekLa+eG TRIDC4AG009990.5 150 APRSRGPLKPVEMVINGIDFDISRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTSISTYPLPMNTKRRGARIAGRKMSQGAFKKVLEKLAGEG 242 79******************************************************************************************* PP GAGA_bind 277 ydlsnpvDLkdhWAkHGtnkfvtir 301 y+l+np+DLk++WAkHGtnkfvtir TRIDC4AG009990.5 243 YNLNNPIDLKTFWAKHGTNKFVTIR 267 ************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 267 aa Download sequence |
MVTANPLVAC PPSRRLFTWI LCAMRPGCTP RSISISSSTS TITRTNINSS ISISINIPVN 60 PGHAVHHHPT GFGMMPDARG AHTLQMMQPQ EPPVPEEEKI APPLVEEHSV VGSKPPVKKR 120 QQGRQPKLPK PKKPKKVATP GEDGAPKARA PRSRGPLKPV EMVINGIDFD ISRIPTPVCS 180 CTGAPQQCYR WGAGGWQSAC CTTSISTYPL PMNTKRRGAR IAGRKMSQGA FKKVLEKLAG 240 EGYNLNNPID LKTFWAKHGT NKFVTIR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 131 | 137 | PKKPKKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68120.1 | 2e-63 | BBR-BPC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG009990.5 |