PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG009920.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 177aa MW: 19373.2 Da PI: 6.5079 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.6e-15 | 16 | 58 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd l+v++ + +G++ W+tIa+ + gRt++ +k+rw+++ TRIDC4AG009920.2 16 PFTVEEDMLIVKYQAAYGNR-WSTIAEFLS-GRTDNAIKNRWNSV 58 89******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
LRWCQHLDPR VEAVKPFTVE EDMLIVKYQA AYGNRWSTIA EFLSGRTDNA IKNRWNSVLH 60 KRAPTLQGPP RPLAPSADRK AASPEVTPGC LPLFPLASGD VRMSSRSTEV VPEAETCAAA 120 RECLELFPLV PGDIRGDAGT AAPSDMSCGA GDPLTELRIW PAARVVFDVM PLQAYRM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 4e-20 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG009920.2 |