PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG009920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 241aa MW: 26353 Da PI: 7.9369 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.1e-14 | 25 | 71 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 + WT+ Ed+ll + v++ Gg+ +W++I r ++ gR k+c++rw ++l TRIDC4AG009920.1 25 KMWTKREDDLLREQVRRCGGPhNWDSICRALP-GRNSKSCRLRWCQHL 71 67******************************.***********9986 PP | |||||||
2 | Myb_DNA-binding | 47.4 | 4.3e-15 | 80 | 122 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd l+v++ + +G++ W+tIa+ + gRt++ +k+rw+++ TRIDC4AG009920.1 80 PFTVEEDMLIVKYQAAYGNR-WSTIAEFLS-GRTDNAIKNRWNSV 122 89******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
PSSFPATSGS DAGACDDGLP HAAKKMWTKR EDDLLREQVR RCGGPHNWDS ICRALPGRNS 60 KSCRLRWCQH LDPRVEAVKP FTVEEDMLIV KYQAAYGNRW STIAEFLSGR TDNAIKNRWN 120 SVLHKRAPTL QGPPRPLAPS ADRKAASPEV TPGCLPLFPL ASGDVRMSSR STEVVPEAET 180 CAAARECLEL FPLVPGDIRG DAGTAAPSDM SCGAGDPLTE LRIWPAARVV FDVMPLQAYR 240 M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 4e-34 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG009920.1 |