PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 274aa    MW: 29941.6 Da    PI: 7.0098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-12135183355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.5 135 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 183
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MYSPPCSAAG SNGERSFAAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGS  60
GTELSRNMSM EKGLKGGKRK GSGEGSSTMH SQQEETGGMS QREVSMERAG EKEGDAASNR  120
EDYVHIRAKR GQATNNHSLA ERFRREKINE RMKHLQDLVP GCNKITGKAM MLDEIINYVQ  180
SLQRQVEFLS MKLSAVSPEL NCDLDLQDIL CPQDARSAFP GYGQRLGSVH PNSNMYRASQ  240
PGLSRPELYG NGIIIPNPAN VHMARAAQQL SAFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.16e-45bHLH family protein