PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 279aa    MW: 30668.3 Da    PI: 6.9051
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-12146194355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.16 146 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 194
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
RDHVSDHCFS WQMYSPPCSA AGSNGERSFA AGANPLALLD HAMDFDEHVL FPMHNAGMQD  60
GVQFYNPTAG GSGTELSRNM SMEKGLKGGK RKGSGEGSST MHSQEETGGM SQREVSMERA  120
GEKEGDAASN REDYVHIRAK RGQATNNHSL AERFRREKIN ERMKHLQDLV PGCNKITGKA  180
MMLDEIINYV QSLQRQVEFL SMKLSAVSPE LNCDLDLQDI LCPQDARSAF PGYGQRLGSV  240
HPNSNMYRAS QPGLSRPELY GNGIIIPNPA NVHMARAAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-44bHLH family protein