PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG007300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 330aa    MW: 36515 Da    PI: 7.7281
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG007300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3505.2e-16781641099
                       HHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  10 vlksgrlvlpkkfaeeh..ggkkeesktltled.esg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +s+rl+lp kf++    g  k  +++++l+   +g r W+vk+  +   g+++l++GW++F++a++L+ g f+vF++dg  ++ l+vkvf+
  TRIDC4AG007300.1  78 N-SSSRLRLPDKFTRVLldG-GK--PQEVKLQEaGHGrRFWDVKVVLDAD-GHMYLGRGWEQFARAHDLRLGYFLVFSFDG--DAVLTVKVFD 163
                       4.5567********777844.43..446887774555699*****65555.5778***********************887..5556999998 PP

                       S CS
                B3  99 k 99 
                        
  TRIDC4AG007300.1 164 V 164
                       5 PP
2B338.81.7e-122303041286
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldg 86 
                       +++ l +p +f  +hg+ ++++++l++   +g+sW v l+++ k g+     ++ GW +F+ +n L egD++ F+  +
  TRIDC4AG007300.1 230 QEQYLNVPVDFQLAHGYAERSKVELRM---RGKSWLVHLKHNPKTGGrprASFRYGWHQFCVDNALGEGDTCFFRALR 304
                       56678999***99**999888766664...67*******995555555679***********************9544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
GFATWHGIHG IVGSFFFLFL PLPLALPSSQ APVSPPSQPA AAERGPGDRH RRLLSATPLR  60
PETGEMEGFE FFQIILDNSS SRLRLPDKFT RVLLDGGKPQ EVKLQEAGHG RRFWDVKVVL  120
DADGHMYLGR GWEQFARAHD LRLGYFLVFS FDGDAVLTVK VFDVSMCRRH YQHDGDTSSG  180
SSSDGDSGSS NASDGGSGGN NWSLAEMDVE DGPTGQFSAM LRKCNLGMKQ EQYLNVPVDF  240
QLAHGYAERS KVELRMRGKS WLVHLKHNPK TGGRPRASFR YGWHQFCVDN ALGEGDTCFF  300
RALRQGSAGG GGEDHLLKVE VRRRDGSFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.16e-17B3 family protein