PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG006570.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 195aa MW: 21054.6 Da PI: 10.3892 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.5e-11 | 120 | 160 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++Le+Av+YIk +q TRIDC4AG006570.2 120 RKRREKINERLKVLQNLIPNG-----TKVDISTMLEEAVHYIKFMQ 160 9******************97.....8****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
RKFGDQNGTQ SDAVTAPKKK ARSTAPPVQR KGKSSAQPKK ASKGSCSRGA QEESNGEATN 60 NVQSSSNYLS DEEGSLEMTS CSNMSSASKK TSSSRGDHGG GAKARAGRGA ATDPQSLYAR 120 KRREKINERL KVLQNLIPNG TKVDISTMLE EAVHYIKFMQ LQIKLLSSDD MWMFAPIAYN 180 GFNVGLDLKI APPQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 23 | PKKKARS |
2 | 120 | 125 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 2e-47 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG006570.2 |