PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG005810.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 230aa MW: 25632.4 Da PI: 10.5558 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.6 | 5.2e-06 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TRIDC4AG005810.8 55 FVCEICNKGFQRDQNLQLHRRGH 77 89*******************88 PP | |||||||
2 | zf-C2H2 | 14.8 | 8.2e-05 | 131 | 153 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TRIDC4AG005810.8 131 WKCDKCSKKYAVQSDWKAHAKTC 153 58******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEVDTSSATA KSGGAPPPPP PGPPAKKKRA LPGMPDPDAE VIALSPKTLM ATNRFVCEIC 60 NKGFQRDQNL QLHRRGHNLP WKLRQRSGKE VRKRVYVCPE PSCVHHDASR ALGDLTGIKK 120 HFCRKHGEKK WKCDKCSKKY AVQSDWKAHA KTCGSREYRC DCGTLFSRRD SFITHRAFCD 180 ALAEESAKAR APPAEDGSSG AATFCLWFMQ SGRSAPPRLS LSSSTRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 4e-98 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG005810.8 |