PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG005810.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 241aa MW: 26186.9 Da PI: 9.5863 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.6e-06 | 61 | 83 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TRIDC4AG005810.10 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP | |||||||
2 | zf-C2H2 | 14.7 | 8.8e-05 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TRIDC4AG005810.10 137 WKCDKCSKKYAVQSDWKAHAKTC 159 58******************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
QDSAAAMEVD TSSATAKSGG APPPPPPGPP AKKKRALPGM PDPDAEVIAL SPKTLMATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVRKR VYVCPEPSCV HHDASRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHAKTCG SREYRCDCGT LFSRRDSFIT 180 HRAFCDALAE ESAKARAPPA EDGSSGAAAP PALPPPPAAP VPLQQLPPAP APQQHEEPGQ 240 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66730.1 | 2e-98 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG005810.10 |