PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG000390.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 23938.9 Da PI: 5.0362 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 73 | 2.6e-23 | 1 | 48 | 4 | 51 |
-SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 en rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s TRIDC4AG000390.7 1 ENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 48 57788****************************************986 PP | |||||||
2 | K-box | 44.3 | 7.8e-16 | 80 | 159 | 19 | 98 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + a+L++e+ + + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k +l een +L+++ TRIDC4AG000390.7 80 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQA 159 567888888888888889**********************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
ENLAARQVTF SKRRRGLFKK AEELSILCDA EVGLAVFSAT GKLFQFASSS MNQIIDRYNS 60 HSKILKKADE PSQLDLHEDS NCARLRDELA EASLWLQQMR GEELQSLNVQ QLQALEKSLE 120 SGLGSVLKTK SQKIMDQISE LERKRVQLIE ENARLKEQAS KMEMQVAADS PVVYEEGQSS 180 ESVTNTSYPR PPLDTEDSSD TSLRLGLPLY NSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 5e-78 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG000390.7 |