PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG000390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 27634.2 Da PI: 7.3516 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.4 | 1e-24 | 27 | 76 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s TRIDC4AG000390.1 27 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 76 8**********************************************986 PP | |||||||
2 | K-box | 44.1 | 8.9e-16 | 108 | 188 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + a+L++e+ + + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k +l een +L+++l+ TRIDC4AG000390.1 108 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQLK 188 567888888888888889***********************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
SDCGEGRRGT RGEDRMAGRR ERIAIRRIEN LAARQVTFSK RRRGLFKKAE ELSILCDAEV 60 GLAVFSATGK LFQFASSSMN QIIDRYNSHS KILKKADEPS QLDLHEDSNC ARLRDELAEA 120 SLWLQQMRGE ELQSLNVQQL QALEKSLESG LGSVLKTKSQ KIMDQISELE RKRVQLIEEN 180 ARLKEQLKLQ ASKMEMQVAA DSPVVYEEGQ SSESVTNTSY PRPPLDTEDS SDTSLRLGLP 240 LYNSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-75 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG000390.1 |