PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG087120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 230aa    MW: 25521.4 Da    PI: 10.0508
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG087120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.11.2e-142976148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT++Ed +l+  v+++G ++W+  a+  g++Rt+k+c++rw +yl
  TRIDC3BG087120.2 29 KGPWTEQEDMKLAWFVRLFGERRWDFLAKVSGLNRTGKSCRLRWVNYL 76
                      79********************************************97 PP
2Myb_DNA-binding57.92.3e-1882126147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rgr+++eE+ l vd+++++G++ W++Ia+ m+ gRt++++k++w+++
  TRIDC3BG087120.2  82 RGRMSPEEERLVVDLHARWGNR-WSRIAKAMP-GRTDNEIKNYWRTH 126
                       89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MKTKQASKAK AAPSPGKEEE AVAPGGFRKG PWTEQEDMKL AWFVRLFGER RWDFLAKVSG  60
LNRTGKSCRL RWVNYLHPDL KRGRMSPEEE RLVVDLHARW GNRWSRIAKA MPGRTDNEIK  120
NYWRTHTRKL HKDTRAASAA SASTTTTTST SMSAASPATT SSSSSSSTND NDNHSHHGHG  180
DQETAASQEQ ADHQLLYTSG IGMDSHLLWN DALMDSYAWG AAAPSMIVPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.39e-61MYB family protein