PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG067780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 213aa MW: 23550.7 Da PI: 8.9623 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 35.9 | 1.3e-11 | 106 | 131 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C ++ +tG Ck+G+ CkF+H++ TRIDC3BG067780.1 106 DQPECIYYIKTGDCKFGAVCKFHHPR 131 689*********************96 PP | |||||||
2 | zf-CCCH | 42.9 | 7.8e-14 | 151 | 177 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++elC+f++r+G+Ck+G +CkF H++ TRIDC3BG067780.1 151 PGEELCKFYSRYGICKFGVNCKFDHPM 177 689**********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MASWTYPRGS FIPSPRWQSP SNYTPMIVPQ GLVQVPNWNS YPGQMVPVSS PESRLQSPGA 60 QQYYGTSRQG EASAGNQGMQ SPYRSSSFPA PQYALQRENV FPERPDQPEC IYYIKTGDCK 120 FGAVCKFHHP RVRSQPPPDC ILSPMGLPLR PGEELCKFYS RYGICKFGVN CKFDHPMAAP 180 MGVYAYGYSA SASPNAPMAR RLLESPSGSA YAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02830.1 | 2e-62 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG067780.1 |