PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 517aa    MW: 55907.5 Da    PI: 6.4599
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.17.3e-1071445161374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn..sseelaalklfsevsPi 90 
                       lv+lL++cAeav+ +d ++a alL +l+  a  +g+++qR+a++f+++La rla   +        + + ++++     +  al + +e++P+
  TRIDC3BG062600.2 144 LVQLLVACAEAVACRDRAQAAALLRELQVGAPVHGTAFQRVASCFVQGLADRLALAHPPALGPAsMAFSVPRSSclDGARGEALAVAYELCPY 236
                       689***************************************************96665554431333333333456677788888******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                       l+f+h++aN  Ilea++ge+ vH++D+++++Gl    QW aLl+ La+R++g+p ++R+Tgvg+    + ++++++g+ ++ +Aeelg+ +ef
  TRIDC3BG062600.2 237 LRFAHFVANASILEAFDGESNVHVVDLGMTMGLnrghQWRALLDGLATRAGGKPaRVRVTGVGA----RVDTMRAVGREIETYAEELGMCLEF 325
                       ***************************9865433333*************77666*********....9************************ PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                       ++ v ++le+l++++L ++ +Ea+a+n+vl+lh +++es    +   +vL+++++lsPk +v+veq+a hn++ Fl rf+eal+yy+alfd+l
  TRIDC3BG062600.2 326 RA-VDRTLESLHVDDLCIDAHEAVAINSVLELHCVVKESRGALN---SVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRFMEALHYYAALFDAL 414
                       **.799******************************88877777...8********************************************* PP

              GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWk 363
                       +a lpr +  r+ vE++  g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++   a++a+  l++ + + gy+v ee+g+lvlgWk
  TRIDC3BG062600.2 415 DAALPRYDARRARVEQFHYGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSLPIKM--AAKAREWLEENAgGSGYTVAEEKGCLVLGWK 505
                       *********************************************************975..4567777777777****************** PP

              GRAS 364 drpLvsvSaWr 374
                       ++p++++S+W+
  TRIDC3BG062600.2 506 GKPVIAASCWK 516
                       **********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MVGMARNHFP TSWQTQEGAS VCTNQELDYD HPHYLGIEEV ALDGVELELG PRASKATKVD  60
YLSSPYHASW PPAQADSESS RVRKTKQFRD VLETCKQKVE AMEALEHSPP VAGGGFEEQA  120
GEAVVAVGDV GGGGGGSGAD GMRLVQLLVA CAEAVACRDR AQAAALLREL QVGAPVHGTA  180
FQRVASCFVQ GLADRLALAH PPALGPASMA FSVPRSSCLD GARGEALAVA YELCPYLRFA  240
HFVANASILE AFDGESNVHV VDLGMTMGLN RGHQWRALLD GLATRAGGKP ARVRVTGVGA  300
RVDTMRAVGR EIETYAEELG MCLEFRAVDR TLESLHVDDL CIDAHEAVAI NSVLELHCVV  360
KESRGALNSV LQTIRKLSPK AFVLVEQDAG HNGPFFLGRF MEALHYYAAL FDALDAALPR  420
YDARRARVEQ FHYGAEIRNV VGCEGAARVE RHERADQWRR RMSRAGFQSL PIKMAAKARE  480
WLEENAGGSG YTVAEEKGCL VLGWKGKPVI AASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.14e-58GRAS family protein