PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG062600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 276aa    MW: 30285.6 Da    PI: 10.0392
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG062600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS210.21.2e-6471275165374
              GRAS 165 LakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                       ++ +Aeelg+ +ef++ v ++le+l++++L ++ +Ea+a+n+vl+lh +++es    +   +vL+++++lsPk +v+veq+a hn++ Fl rf
  TRIDC3BG062600.1  71 IETYAEELGMCLEFRA-VDRTLESLHVDDLCIDAHEAVAINSVLELHCVVKESRGALN---SVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRF 159
                       5789************.799******************************88877777...8******************************* PP

              GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgy 349
                       +eal+yy+alfd+l+a lpr +  r+ vE++  g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++   a++a+  l++ + + gy
  TRIDC3BG062600.1 160 MEALHYYAALFDALDAALPRYDARRARVEQFHYGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSLPIKM--AAKAREWLEENAgGSGY 250
                       ***********************************************************************975..4567777777777**** PP

              GRAS 350 rveeesgslvlgWkdrpLvsvSaWr 374
                       +v ee+g+lvlgWk++p++++S+W+
  TRIDC3BG062600.1 251 TVAEEKGCLVLGWKGKPVIAASCWK 275
                       ************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
PRSTTSARRT TPHGRLRRPI PSRRASGRRS RHGVPARRVV LRAGPGGPAG PGAPAGPGPG  60
EHGVQRPAVV IETYAEELGM CLEFRAVDRT LESLHVDDLC IDAHEAVAIN SVLELHCVVK  120
ESRGALNSVL QTIRKLSPKA FVLVEQDAGH NGPFFLGRFM EALHYYAALF DALDAALPRY  180
DARRARVEQF HYGAEIRNVV GCEGAARVER HERADQWRRR MSRAGFQSLP IKMAAKAREW  240
LEENAGGSGY TVAEEKGCLV LGWKGKPVIA ASCWKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-34GRAS family protein