PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG061100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 262aa    MW: 27324.8 Da    PI: 9.5252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG061100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-192776255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a++ a+++++g
  TRIDC3BG061100.2 27 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDDAALRFRG 76
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
SAATMEEHRS RSPASSNVEA AEAPRRRYRG VRQRPWGKWA AEIRDPHKAA RVWLGTFETA  60
EAAARAYDDA ALRFRGSRAK LNFPEDARLH PATVAPAAAP ARVPIAAASA STPGMYAGAG  120
PASDYLRYQM LLQGRGAAAN QGNLLSFYGG GGGGGGMSSS YGGGMSSSYG GGGGTMSGFL  180
GSYYSFPTSS VSVATVPSSS SASSAPGHYY SSPHDSQQHQ QQQGNAAAEW SWESALAPYP  240
GTTTAASWSD SSQQPYHPPH TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-15ERF family protein