PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG060470.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 205aa MW: 22438.7 Da PI: 12.8337 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29 | 2.5e-09 | 144 | 182 | 9 | 47 |
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++l++d+ +++G g+W+ I+r Rt+ q+ s+ qky TRIDC3BG060470.2 144 HQLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 182 89************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
CRVVAAGKRV RETRGHGLLL PAGRAAGEEA VGQGGGQGVR GRAGDAPGPR ARPVGARRGA 60 APGAHPTGGL GALPGARRRR RPHRARRGGH ARLLGRRRRR PRYRGQPRPP RRQAPRRGAP 120 ARHTLVRGRA QVRVPKSPSL LFSHQLFLDG LEKYGRGDWR NISRFAVRSR TPTQVASHAQ 180 KYFIRQANAA TRDSKRKSIH DITTP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 99 | RRRRRPHRARRGGHARLLGRRRR |
2 | 78 | 100 | RRRRRPHRARRGGHARLLGRRRR |
3 | 79 | 101 | RRRRRPHRARRGGHARLLGRRRR |
4 | 86 | 99 | RRGGHARLLGRRRR |
5 | 87 | 100 | RRGGHARLLGRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 2e-23 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG060470.2 |