PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG060470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 176aa MW: 20209.4 Da PI: 7.7227 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.6 | 1.4e-08 | 13 | 59 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 r +W +eEd+ + a +l+ + +W+++a++++ gRt+ + +++q TRIDC3BG060470.1 13 RRPWAKEEDKAFEAALVMLPDHapdRWERVAARLP-GRTPQEAWEHYQ 59 679*****************99*************.****98777777 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 109 | 153 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++d+ +++G g+W+ I+r Rt+ q+ s+ qky TRIDC3BG060470.1 109 PWSEEEHKLFLDGLEKYGRGDWRNISRFAVRSRTPTQVASHAQKY 153 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MDFYYQQAGP PARRPWAKEE DKAFEAALVM LPDHAPDRWE RVAARLPGRT PQEAWEHYQA 60 LVADVDLIER GAVDTPDCWD DDDDGRATVA SRGRPAGKPR GEERRRGIPW SEEEHKLFLD 120 GLEKYGRGDW RNISRFAVRS RTPTQVASHA QKYFIRQANA ATRDSKRKSI HDITTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 1e-48 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG060470.1 |