PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG060460.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 26468.5 Da PI: 5.6992 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 136.6 | 1.6e-42 | 5 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lppG+rF Pt+eel+++yL++k++g++ ++e+vi+ vd+y+v+P +L + + +e + w++F+ r++++a+g r++r+t sgyWka g+ TRIDC3BG060460.5 5 LPPGYRFYPTEEELICFYLRNKLDGSRGDIERVIPVVDVYSVDPLQLSEiherLCGGEGEPWFYFCARQEREARGGRPSRTTPSGYWKAAGTP 97 79****************************99***************84344433447789******************************** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++ +gl+kt+vfy+grap+g+kt+W m+eyr+ TRIDC3BG060460.5 98 GVVYSADRRPIGLRKTMVFYRGRAPSGTKTKWKMNEYRA 136 *************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MADGLPPGYR FYPTEEELIC FYLRNKLDGS RGDIERVIPV VDVYSVDPLQ LSEIHERLCG 60 GEGEPWFYFC ARQEREARGG RPSRTTPSGY WKAAGTPGVV YSADRRPIGL RKTMVFYRGR 120 APSGTKTKWK MNEYRAFQHE HHDDGAGAPT ATGGPHLRSE FSLCRLYTKS GTLRQFDRRP 180 VAAAARGDIP GPSTAATASP GDGDGSGGSM QPLEEELMEG ADGDPYGDDI ATLAALLYSP 240 TD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 3e-68 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG060460.5 |