PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG059580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 233aa MW: 25279.3 Da PI: 7.2114 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 3 | 42 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+ +d ll+da+k +G++ W+tIar+++ gR+++ +k++w+ TRIDC3BG059580.1 3 WTEADDILLIDAHKIHGNR-WSTIARCLP-GRSENAIKNHWN 42 *******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
HIWTEADDIL LIDAHKIHGN RWSTIARCLP GRSENAIKNH WNATKRSLKS KRRLKKTSQQ 60 AAPGQFTLLE EYIRDKTMAD ENVAPPSPSS GLGYDGQVFP NAAAMLAVST PPGMGQYLHP 120 ADAAGSSSQA GMMNLRAPLP DLNAAYSGEM LERYYFPASF PTYSNNNLLH HGPEPAFPQM 180 FSAQGRMLAA CTNLKLFPLP QYLGGGYYGS ETGSSSAGGS SDQDEDVVQM ASR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 2e-17 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG059580.1 |