PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG059570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 453aa MW: 49124 Da PI: 6.7229 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.1 | 2.4e-19 | 141 | 186 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+WT+eEdell ++v ++G + W+tI+++++ gR +kqc++rw ++ TRIDC3BG059570.1 141 RGPWTEEEDELLRRLVDEHGEHKWATISEHLP-GRIGKQCRERWTNH 186 89******************************.***********997 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1e-16 | 197 | 236 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+ +d ll+da+k +G++ W++Iar+++ gR+++ +k++w+ TRIDC3BG059570.1 197 WTEADDILLIDAHKVHGNR-WSSIARCLP-GRSENAVKNHWN 236 *******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence |
LCQTLPLSLS LDSAKFHPPS PTSSLVSEFR PPAMASLGDM LLNQELAAVA AMSADAHGRF 60 GRYTLSPAHG FSHFQQAGSA PTGFPDTGLL VSGFGMPPST FIMPEGTHAA AGYGAEVVPV 120 EIPVVRRQRP AARNDGATPF RGPWTEEEDE LLRRLVDEHG EHKWATISEH LPGRIGKQCR 180 ERWTNHVRPG IKKEHIWTEA DDILLIDAHK VHGNRWSSIA RCLPGRSENA VKNHWNATRR 240 SLKSKRRFKK KTSQQAAPGQ FTLLEEYIRD KMMADENLAP SSPLAGVAYD GQVVPGAAAM 300 LAVSTPPGMG QYLHPANAAG SSSQAGMMNL SVPLPDLNAY SGEMLERYYY PTYSNNLLPY 360 GPEPAFPQMF NAQGRMHAAC TNLNLFPLPQ HPGGGYYGSE TGRRSAGGGY YGSETGRSSA 420 GGSSDQDEDV AQMASREFQT SEDEATLDLT GFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 7e-34 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG059570.1 |