PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG054610.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 101aa MW: 11402.8 Da PI: 9.4947 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.8e-17 | 25 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++ +grW+A+I + +++ +lg f+t eeAa+a++ a+ +++g TRIDC3BG054610.2 25 SKYRGVTRHHANGRWEARIGHaA----GTQYSYLGIFDTQEEAARAYDLAAIRIRG 76 89****************99933....35*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MQRMTREEYL ARLRRNSSGF TRGVSKYRGV TRHHANGRWE ARIGHAAGTQ YSYLGIFDTQ 60 EEAARAYDLA AIRIRGPGAV TNFDADCYVD IPQPLPCKAE P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 5e-36 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG054610.2 |