PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG049090.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 584aa MW: 63790.1 Da PI: 8.6693

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG049090.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.5	7e-25	51	152	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + + s++l+ +d++g +W++++iyr++++r++lt+GW++Fv+ ++L +gD v+F + TRIDC3BG049090.3 51 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyqQ-IR-PSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL--R 139 99**************************9843.43.4569********************************************..3 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+++v+r+ TRIDC3BG049090.3 140 GDDGELRLGVRRA 152 489999*9986 PP
2	Auxin_resp	111.9	6.4e-37	177	258	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a++++++svF+++YnPra++seF+v+++k++k+l++++++GmRfk+++ +ed++err sG+++g++++dp+rW++SkW+sL+ TRIDC3BG049090.3 177 VANSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGMITGINEVDPIRWTGSKWKSLQ 258 68999***************************************************.9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
ADPATDEVYA RLAMVAEGEI FEKNMGGGRF EGEDDMEDGD RERKSRMLHM FCKTLTASDT 60 STHGGFSVPR RAAEDCFPPL DYQQIRPSQE LVAKDLHGAK WRFRHIYRGQ PRRHLLTTGW 120 SSFVNKKKLV SGDAVLFLRG DDGELRLGVR RAIQLKNEAL LKAFNSNSSK IHTLSAVANS 180 LKHRSVFHIC YNPRAAASEF IVPYWKFLKS LNRPFCIGMR FKIQYGSEDV NERRSGMITG 240 INEVDPIRWT GSKWKSLQVR WEDGTDCNSQ NRLSPWDIEI VGGSVSIAQS LSASSSKRTK 300 LCPQGNVDVP TLYGNVRPDS VGADKLPRVL QGQELMGSGT HRVTCPPQPG GATEFRRYDG 360 TGFLTDTRSC LLSGPASRLP PQSSYFAYQP VGFGESVGFP EVLQGQEVCQ TVPLYQGMVS 420 DTCSAKAGYG MYNYMRTSSA MNGGFSSAPQ GYPLSLSTPP RAVAASPSSA AVPPQLWLAS 480 KSNEEAANGS QLNPFGIRKV PGDGAAKLGD GAAKLGSDGR KVARTSCMLF GFSLTEKMLP 540 TEEDSAKEGN HEVDCQNPRM LDLFGYNRAT PGTLHALCAA PLGI

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

ADPATDEVYA RLAMVAEGEI FEKNMGGGRF EGEDDMEDGD RERKSRMLHM FCKTLTASDT  60
STHGGFSVPR RAAEDCFPPL DYQQIRPSQE LVAKDLHGAK WRFRHIYRGQ PRRHLLTTGW  120
SSFVNKKKLV SGDAVLFLRG DDGELRLGVR RAIQLKNEAL LKAFNSNSSK IHTLSAVANS  180
LKHRSVFHIC YNPRAAASEF IVPYWKFLKS LNRPFCIGMR FKIQYGSEDV NERRSGMITG  240
INEVDPIRWT GSKWKSLQVR WEDGTDCNSQ NRLSPWDIEI VGGSVSIAQS LSASSSKRTK  300
LCPQGNVDVP TLYGNVRPDS VGADKLPRVL QGQELMGSGT HRVTCPPQPG GATEFRRYDG  360
TGFLTDTRSC LLSGPASRLP PQSSYFAYQP VGFGESVGFP EVLQGQEVCQ TVPLYQGMVS  420
DTCSAKAGYG MYNYMRTSSA MNGGFSSAPQ GYPLSLSTPP RAVAASPSSA AVPPQLWLAS  480
KSNEEAANGS QLNPFGIRKV PGDGAAKLGD GAAKLGSDGR KVARTSCMLF GFSLTEKMLP  540
TEEDSAKEGN HEVDCQNPRM LDLFGYNRAT PGTLHALCAA PLGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-122	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG049090.3