PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG049090.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 481aa MW: 51946.9 Da PI: 9.3211

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG049090.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.2	2e-10	7	49	55	99
ETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 55 ksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++r++lt+GW++Fv+ ++L +gD v+F + +++el+++v+r+ TRIDC3BG049090.2 7 QPRRHLLTTGWSSFVNKKKLVSGDAVLFL--RGDDGELRLGVRRA 49 6789***********************..3489999*9986 PP
2	Auxin_resp	112.3	4.8e-37	74	155	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a++++++svF+++YnPra++seF+v+++k++k+l++++++GmRfk+++ +ed++err sG+++g++++dp+rW++SkW+sL+ TRIDC3BG049090.2 74 VANSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGMITGINEVDPIRWTGSKWKSLQ 155 68999***************************************************.9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
APLLPGQPRR HLLTTGWSSF VNKKKLVSGD AVLFLRGDDG ELRLGVRRAI QLKNEALLKA 60 FNSNSSKIHT LSAVANSLKH RSVFHICYNP RAAASEFIVP YWKFLKSLNR PFCIGMRFKI 120 QYGSEDVNER RSGMITGINE VDPIRWTGSK WKSLQVRWED GTDCNSQNRL SPWDIEIVGG 180 SVSIAQSLSA SSSKRTKLCP QGNVDVPTLY GNVRPDSVGA DKLPRVLQGQ ELMGSGTHRV 240 TCPPQPGGAT EFRRYDGTGF LTDTRSCLLS GPASRLPPQS SYFAYQPVGF GESVGFPEVL 300 QGQEVCQTVP LYQGMVSDTC SAKAGYGMYN YMRTSSAMNG GFSSAPQGYP LSLSTPPRAV 360 AASPSSAAVP PQLWLASKSN EEAANGSQLN PFGIRKVPGD GAAKLGDGAA KLGSDGRKVA 420 RTSCMLFGFS LTEKMLPTEE DSAKEGNHEV DCQNPRMLDL FGYNRATPGT LHALCAAPLG 480 I

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

APLLPGQPRR HLLTTGWSSF VNKKKLVSGD AVLFLRGDDG ELRLGVRRAI QLKNEALLKA  60
FNSNSSKIHT LSAVANSLKH RSVFHICYNP RAAASEFIVP YWKFLKSLNR PFCIGMRFKI  120
QYGSEDVNER RSGMITGINE VDPIRWTGSK WKSLQVRWED GTDCNSQNRL SPWDIEIVGG  180
SVSIAQSLSA SSSKRTKLCP QGNVDVPTLY GNVRPDSVGA DKLPRVLQGQ ELMGSGTHRV  240
TCPPQPGGAT EFRRYDGTGF LTDTRSCLLS GPASRLPPQS SYFAYQPVGF GESVGFPEVL  300
QGQEVCQTVP LYQGMVSDTC SAKAGYGMYN YMRTSSAMNG GFSSAPQGYP LSLSTPPRAV  360
AASPSSAAVP PQLWLASKSN EEAANGSQLN PFGIRKVPGD GAAKLGDGAA KLGSDGRKVA  420
RTSCMLFGFS LTEKMLPTEE DSAKEGNHEV DCQNPRMLDL FGYNRATPGT LHALCAAPLG  480
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	3e-72	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG049090.2