PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG046050.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 122aa MW: 13745.7 Da PI: 10.1947 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.3 | 2.9e-15 | 2 | 29 | 8 | 35 |
GATA 8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35 kTp+WR gp g+ktLCnaCG++y++ +l TRIDC3BG046050.3 2 KTPQWRTGPMGPKTLCNACGVRYKSGRL 29 8***********************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
DKTPQWRTGP MGPKTLCNAC GVRYKSGRLV PEYRPAASPT FVTSRHSNSH RKVLELRRQR 60 EMHHYHQPSQ LQQHAVAGGV GRIMHMESHL LFDGPAAPPI LGGGDDFLIH HHLGADYRQQ 120 LI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25830.1 | 1e-45 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG046050.3 |