PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG046050.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 379aa    MW: 42067.9 Da    PI: 12.5882
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG046050.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.39e-18252286135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC3BG046050.2 252 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRL 286
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
CLPLSRRPWR RRCPTTTAAT RRAPTSSSST TSSRCRATTT RRRRKGLARR RSCRPTLPPP  60
PPSSSSRRPG SGTRRPTRPR SRPSTAAATP SPASPMATSP AASASRTISW RSWNGCPTTW  120
ARARRASPPR TYTSCSSSPA SPPGASPRRT DHLLRRPPLP RRSPACSCRR APSPPRPVAS  180
APALRRATGR PACSFSRRPR PPRRPRRPWP SRRQSPASQP RHSMSRSPPS RQRRRRCPPS  240
GVTAAANEGR RCLHCETDKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY RPAASPTFVT  300
SRHSNSHRKV LELRRQREMH HYHQPSQLQQ HAVAGGVGRI MHMESHLLFD GPAAPPILGG  360
GDDFLIHHHL GADYRQQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-48GATA family protein