PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3BG045260.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 162aa MW: 18920.8 Da PI: 10.5364 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 46.4 | 6.7e-15 | 9 | 41 | 38 | 71 |
E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71 d+kn+rRR+YD++NVL al++i+k ek+eirw+g TRIDC3BG045260.4 9 DEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 41 789*********************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 162 aa Download sequence |
MAHIGQGFDE KNIRRRVYDA FNVLIALRVI AKEKKEIRWM GLSNYRYEKI KKLEEVRKEL 60 TNKIRNKKAL LQEIEKQFDD LQNIKLRNQT LESSAENVNG IRLPFVLVKT SRKARVEIEI 120 SDDSKFAHFE FNGAPFTLHD DLSILEGIRR NSIGRAGRAT LH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.2 | 1e-42 | E2F/DP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3BG045260.4 |