PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041010.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 552aa    MW: 61338 Da    PI: 8.1568
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041010.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.3e-1819862999
                      -..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      + + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +++++ l+++v+r+
  TRIDC3BG041010.3 19 QRP-SQELVTKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RDEDGVLRLGVRRA 86
                      433.569999*********************************************..56889899999986 PP
2Auxin_resp104.61.2e-34111191182
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                       +aha++ k++F+++YnPr ++seF+v+++k++++++ ++svGmRfkm++e+ed+serr +G+++g +++dp + ++SkW++L
  TRIDC3BG041010.3 111 VAHAVAVKNIFHIYYNPRLCESEFIVPYWKFMRSFSEPISVGMRFKMKYENEDASERRSTGIITGSRESDP-KSHGSKWKCL 191
                       799********************************************************************.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
LGTGSSDFFA WRLQDYNLQR PSQELVTKDL HGTEWRFRHI YRGQPRRHLL TTGWSAFVNK  60
KKLVSGDAVL FLRDEDGVLR LGVRRAAQLK NVSPFPALFN QDSSLSSLGN VAHAVAVKNI  120
FHIYYNPRLC ESEFIVPYWK FMRSFSEPIS VGMRFKMKYE NEDASERRST GIITGSRESD  180
PKSHGSKWKC LVVRWDDDVE CRWPNRVSPW EIELTGSVSG SHLSSPHSKR LKPCLPQVNP  240
DMLLPSGSVS SDFAESARFH KVLQGQELLG SKTHDGTANS ASRASEARNF QYSDDRNCSI  300
NMSNIPGVPE LGARTPPENH GFSYHCSGFG ESQRFQRVLQ GQEVFHPYEG GTLSDAVIRG  360
SSFCQPDGNC TSGATYKWLT SQGCDYSGPV TLAMPQASSP LSVLMFPQTS SKIHGFEYVC  420
RSLDKDDNIR HVTVNATQDM GRTSHTLPLW PHLVSGKAIA SCTGTKKLHS ISSAEHEPND  480
KDVHTNGCKI FGISLTQKVR VCNEVECSSA NCDFQPLKPQ MSKSLGNNCA TVHEQRPAVG  540
MVVDLSAVDT MI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.13e-87ARF family protein