PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG041010.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 254aa    MW: 29042.2 Da    PI: 9.9297
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG041010.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.31.9e-202891599
                       -EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 15 rlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                        +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   +++++ l+++v+r+
  TRIDC3BG041010.11  2 GFSVPRRAAEDCfppldyNLQRP-SQELVTKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RDEDGVLRLGVRRA 89
                       5899*******9****9866654.469999*********************************************..56889899999986 PP
2Auxin_resp106.43.2e-35114194182
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                        +aha++ k++F+++YnPr ++seF+v+++k++++++ ++svGmRfkm++e+ed+serr +G+++g +++dp + ++SkW++L
  TRIDC3BG041010.11 114 VAHAVAVKNIFHIYYNPRLCESEFIVPYWKFMRSFSEPISVGMRFKMKYENEDASERRSTGIITGSRESDP-KSHGSKWKCL 194
                        799********************************************************************.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
GGFSVPRRAA EDCFPPLDYN LQRPSQELVT KDLHGTEWRF RHIYRGQPRR HLLTTGWSAF  60
VNKKKLVSGD AVLFLRDEDG VLRLGVRRAA QLKNVSPFPA LFNQDSSLSS LGNVAHAVAV  120
KNIFHIYYNP RLCESEFIVP YWKFMRSFSE PISVGMRFKM KYENEDASER RSTGIITGSR  180
ESDPKSHGSK WKCLVVRWDD DVECRWPNRV SPWEIELTGS VSGSHLSSPH SKRLKPCLPQ  240
VNPDMLLPSR LGCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-95ARF family protein