PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG039300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 501aa    MW: 53003.7 Da    PI: 4.9598
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG039300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS430.41.4e-131874491374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       lv+lL++cA av++gd++la a La  +    a ++++ + R+a +ft AL++rl+r      +  +p      + +e+++ ++ f+e++P+l
  TRIDC3BG039300.2  87 LVHLLMSCAGAVEAGDHALAAAHLADANASlaAVSTASGIGRVAVHFTDALSRRLFR------SPATPP----ATDAEHAFLYHHFYEACPYL 169
                       68***********************9998876777779*******************......222222....336799999*********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kf+h+taNqaIlea++g++ vH+iDf+++qGlQWpaL+qaLa Rp+gpp lRiTg+g+p++  ++el+ +g rLa++A++++v+f+f+ ++a+
  TRIDC3BG039300.2 170 KFAHFTANQAILEAFHGCDSVHVIDFSLMQGLQWPALIQALALRPGGPPFLRITGIGPPSPPGRDELRDVGLRLADLARSVRVRFSFRGVAAN 262
                       ********************************************************************************************* PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +l+++++++L++ pgEa+aVn+vlqlhrll+++++++  +d+vL++v sl+Pk+++vveqeadhn++ Fl+rf+eal yysa+fdsl+a   +
  TRIDC3BG039300.2 263 SLDEVHPWMLQIAPGEAVAVNSVLQLHRLLADTADQAP-IDAVLDCVASLQPKIFTVVEQEADHNKPGFLDRFTEALFYYSAVFDSLDAA--S 352
                       ******************************99998888.************************************************988..6 PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++ + + + +++l+rei+++v++eg++r erhe l++Wr+rl++aG+++vpl+ +a  qa++ll  ++++g++vee +g+l+lgW++rpL+s+
  TRIDC3BG039300.2 353 ANGTGNAMAEAYLQREICDIVCNEGTARMERHEPLSQWRDRLGRAGLSAVPLGASALRQARMLLGLFSGEGHSVEEAEGCLTLGWHGRPLFSA 445
                       889999999999********************************************************************************* PP

              GRAS 371 SaWr 374
                       SaWr
  TRIDC3BG039300.2 446 SAWR 449
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MAMGTFPFQW PMDPAPAPPS GLDGSLLPSL LPPPPAPVPD DGAAYYAAAD MQASSMPELA  60
APFPSRDAVA AELAMRRAEE EVAGIRLVHL LMSCAGAVEA GDHALAAAHL ADANASLAAV  120
STASGIGRVA VHFTDALSRR LFRSPATPPA TDAEHAFLYH HFYEACPYLK FAHFTANQAI  180
LEAFHGCDSV HVIDFSLMQG LQWPALIQAL ALRPGGPPFL RITGIGPPSP PGRDELRDVG  240
LRLADLARSV RVRFSFRGVA ANSLDEVHPW MLQIAPGEAV AVNSVLQLHR LLADTADQAP  300
IDAVLDCVAS LQPKIFTVVE QEADHNKPGF LDRFTEALFY YSAVFDSLDA ASANGTGNAM  360
AEAYLQREIC DIVCNEGTAR MERHEPLSQW RDRLGRAGLS AVPLGASALR QARMLLGLFS  420
GEGHSVEEAE GCLTLGWHGR PLFSASAWRA ATVVCDADGE DNHTSNNSNF SGSSGGGSDS  480
NNSSSSNGKC SGVVGASNMF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-123GRAS family protein