PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG039250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 76aa MW: 8953.35 Da PI: 8.5035 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 41.3 | 2.6e-13 | 2 | 27 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +ktelC+ + +tG C+y d+C+FaHg TRIDC3BG039250.1 2 FKTELCNKWEETGACPYCDQCQFAHG 27 79***********************9 PP | |||||||
2 | zf-CCCH | 19 | 2.5e-06 | 40 | 65 | 1 | 26 |
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ykte Cr + + C+yG rC+F H+ TRIDC3BG039250.1 40 YKTEVCRMVLNGEVCPYGHRCHFRHS 65 9******999966**********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence |
MFKTELCNKW EETGACPYCD QCQFAHGVSE LRPVIRHPRY KTEVCRMVLN GEVCPYGHRC 60 HFRHSLTAAE RLLRSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68200.1 | 9e-43 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG039250.1 |