PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG038730.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 173aa    MW: 19371.5 Da    PI: 7.7054
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG038730.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.3e-162972146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+ ++eEd  + +++ +lG++ W+ Ia++++ gRt++++k++w++
  TRIDC3BG038730.2 29 RGSISPEEDMVIRELHSRLGNK-WAEIAKHLP-GRTDNEVKNYWRT 72
                      7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
LARSAAGLNR NGKSCRLRWL NYLRPGLRRG SISPEEDMVI RELHSRLGNK WAEIAKHLPG  60
RTDNEVKNYW RTRVHKKAPH QNQLPAQPAS EATTSVSASA STSHASSTVG DEYTQTSFPY  120
PELSWVATDH HETVDVGAPT ARFCPSEFGG NFWNVPDNFW ETLPLSDPVY EAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27810.13e-37MYB family protein