PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG025100.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23605.7 Da PI: 3.752 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 42.8 | 1.3e-13 | 1 | 40 | 14 | 56 |
AP2 14 rWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 +++AeIrd + r r++lg+f+taeeAak ++ a+ kl+g+ TRIDC3BG025100.3 1 KYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDSAAIKLRGP 40 799*****88.....55*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
KYAAEIRDPW RRVRVWLGTF DTAEEAAKVY DSAAIKLRGP DATVNFQQSE DGEDMEVPTE 60 VAERLPQPPA GSKNGSSSAT SYDSCEESHV AAASPTSVLR SFPQSTLAAA VDDDASKKPS 120 SSSSTTETDE SSGVFGCSFS GDDFAGELAP LYTDFDLLSD FAEPPMDFLS NLPEPAFTFS 180 SDCSLSAYNP CPPSPAALQQ ADEFFEDITD LFQIDPLPVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11140.1 | 6e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG025100.3 |