PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG022560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 256aa MW: 27257.4 Da PI: 5.8418 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 71 | 119 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++aa+++++g TRIDC3BG022560.1 71 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPCPEMAARAHDAAALSIKG 119 9****998.**********843...6***********************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
HAGLRGALCA HMAASEQSSE SSSTSCTSSY STSSCSPRAD DKKRNGGGKR KRAAAADEEP 60 APAAAAAAAP YRGVRMRAWG KWVSEIREPR KKSRIWLGTF PCPEMAARAH DAAALSIKGA 120 RAVLNFPDLA PALPRPASLA PCDVQAAAAR AALMHDHDHQ CCSASTSPAA APDSARGNAP 180 APCDQPAARD EPEHEPPFQP SQGNEQQLTA AQVEMVFDEL APLWVEDVVD FAPSDHCWTA 240 YDCLDPIGFQ PLLWEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 6e-32 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG022560.1 |