PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3BG018950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 123aa MW: 13341.3 Da PI: 10.9418 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 63.3 | 5.7e-20 | 21 | 85 | 22 | 85 |
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfdql 85 +++++k++W++vs++m ergf++sp+qC++k+++lnkryk++ e +++t ++++ + +++d + TRIDC3BG018950.1 21 AAAQQRKGKWRSVSRAMVERGFKVSPQQCEDKFNDLNKRYKRVVELLGRGTaCNVVANPALLDTM 85 45789********************************************9549999999888887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
GVSAGGKAAA AHSHGKAVAS AAAQQRKGKW RSVSRAMVER GFKVSPQQCE DKFNDLNKRY 60 KRVVELLGRG TACNVVANPA LLDTMGELTA KAKEEARKLL RSKRLFFREM CHYHNPGGTA 120 TAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 1e-35 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3BG018950.1 |