PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG017980.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 273aa    MW: 30249 Da    PI: 6.1706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG017980.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.1e-131761347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT+eE+ l++ + ++lG+g+W+ I+r +   Rt+ q+ s+ qky
  TRIDC3BG017980.6 17 PWTEEEHRLFLLGLQKLGKGDWRGISRSFVVSRTPTQVASHAQKY 61
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
RLLLDQWPGR AQERGTPWTE EEHRLFLLGL QKLGKGDWRG ISRSFVVSRT PTQVASHAQK  60
YFIRQTNFSR RKRRSSLFDM VPEMPMDESP DGTEEFMLCG TQDESTSSNK LSLFHLERQK  120
EAECDKDLPT LQLRQHEESE YAGPSLEAPD LEMNNGVSFK TTSVSTVPAF YPALLPVPLT  180
LWPANVSNVE ASNATHEVLK PTPVNLKEAI KADEVVSMSK LSIGGGSSGS MEPSALSLQL  240
TGPTNTRQSA FHVSPPMTRT DLSQGNNSPI HAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-42MYB_related family protein